FindTarget: software for subtractive genome analysis

FindTarget: software for subtractive genome analysis.

In silico subtractive/differential genome analysis is a powerful approach for identifying genus- or species-specific genes, or groups of genes that are responsible for a unique phenotype. By this method, one searches for genes present in one group of bacteria and absent in another group. A software package has been developed, named FindTarget, that has a user-friendly web interface to facilitat...

GeneContent: software for whole-genome phylogenetic analysis

UNLABELLED GeneContent is a software system to infer the genome phylogeny based on an additive genome distance that can be estimated from the extended gene content data, which contains the genome-wide information (absence of a gene family, presence as single copy or presence as duplicates) across multiple species. GeneContent can also be used to explore the genome-wide evolutionary pattern of g...

Fuzzy Subtractive Clustering Based Indexing Approach for Software Components Classification

Software Engineering is not only a technical discipline of its own, but also a problem domain where technologies coming from other disciplines are relevant and can play important role. One important example is knowledge engineering [1], a term that used in a board sense to encompass artificial intelligence, computational intelligence, knowledge bases, data mining, and machine learning. Many of ...

Software Tools for the Analysis of Functional Magnetic Resonance Imaging

Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging of brain functions. Currently, there is a large variety of software packages for the analysis of fMRI data, each providing many features for users. Since there is no single package that can provide all the necessary analyses for the fMRI data, it is helpful to know the features of each software package. ...

Algorithms and a software system for comparative genome analysis